The w and h are columns and rows of voxels added to the resulting image before annotation. W and H are the scaling factor, 1 and 100% are the same. Scale identifies the rescaling of the images that is done before any annotation is performed. If Query is on, then the range will be requeried and set every time a foreground image is selected. Defaults to the display range of the foreground source image. Range is the colorization range that will be used. If the ImageWindow contains an Roi then only the contents of the Roi will be overlayed. If the specified ImageWindow contains an Roi, the image is cropped to the bounding box and cleared outside the Roi, i.e., set to background color.įoreground identifies the foreground image that is colorized. If unspecified the background color is used. The process of generating a colorized overlay is best, but not required, done in three stages.īackground identifies the background image. The impetus for this plugin was my inability to remember how to perform all the necessary steps and the laborious task of doing this again and again whenever my whim for the best representation of my data kicked in, usually right before an abstract deadline. The Colorizer_Overlay plugin provides the ability to apply a LUT, colorbar, and annotation to a map, i.e., quantified image, and overlay this upon a background image.
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